cuspa.io.Transcripts#

class cuspa.io.Transcripts( xy: Any, gene_ids: Any | None, gene_names: list[str] | None, )#

Transcript coordinates and gene metadata from SpatialData.

Attributes:

xy: Device tensor of shape (N, 2).
gene_ids: Optional device int32[N] of gene indices (from a categorical encoding of gene_column), or None if no gene column.
gene_names: List of gene names in category order, so gene_names[gene_ids[i]] recovers the original string. None if no gene column.

Attributes